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seqparse

Parse sequence files (GenBank, FASTA, SnapGene, SBOL) and accession IDs (NCBI, iGEM) to a common format

v0.2.1 URL: https://unpkg.com/seqparse@0.2.1/dist/index.js

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accessionclidnafastagenbankigemncbiparsingrna

icn3d

iCn3D Structure Viewer

v3.45.5 URL: https://unpkg.com/icn3d@3.45.5/icn3d.js

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ncbiicn3d3d viewerproteinstructurenode

@cyanheads/pubmed-mcp-server

Production-ready PubMed Model Context Protocol (MCP) server that empowers AI agents and research tools with comprehensive access to PubMed's article database. Enables advanced, automated LLM workflows for searching, retrieving, analyzing, and visualizing

v1.4.5 URL: https://unpkg.com/@cyanheads/pubmed-mcp-server@1.4.5/dist/index.js

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mcpmodel-context-protocolai-agentllmllm-integrationpubmedpubmed-apincbie-utilitiesbiomedical-researchscientific-literaturecomputational-biologytypescriptai-toolsbioinformaticshealth-techresearch-automationliterature-searchcitation-analysisdata-visualizationapi-servertypescriptnodejsai-toolsresearch-agentgenerative-ai

bionode-ncbi

Node.js module for working with the NCBI API (aka e-utils) using Streams.

v2.0.1 URL: https://unpkg.com/bionode-ncbi@2.0.1/index.js

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biobionodebioinformaticsbiologyncbiapistreamsclientservercli

langchain-pubmed

LangChain.js integration for PubMed API - search biomedical literature and retrieve article metadata

v0.1.2 URL: https://unpkg.com/langchain-pubmed@0.1.2/dist/index.js

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langchainlangchainjspubmedmedicalbiomedicalncbiresearchtoolapisearchmedline