heta-parser

Parsing of Heta-language files.

v0.4.3 URL: https://unpkg.com/heta-parser@0.4.3/src/index.js

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heta parser modeling qsp systems-biology

pyvipr

Dynamic and static visualizations of systems biology models written in SBML, BNGL, and PySB

v1.0.5 URL: https://unpkg.com/pyvipr@1.0.5/lib/index.js

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PySB systems-biology visualization jupyter widgets ipython ipywidgets jupyterlab-extension

@iflow-mcp/go-server

A comprehensive Model Context Protocol server for accessing Gene Ontology data with tools for term search, ontology navigation, gene annotations, and enrichment analysis

v1.0.0 URL: https://unpkg.com/@iflow-mcp/go-server@1.0.0/build/index.js

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mcp model-context-protocol gene-ontology go bioinformatics ontology annotations enrichment-analysis molecular-function biological-process cellular-component gene-annotation semantic-search systems-biology

@iflow-mcp/reactome-server

Production-ready MCP server for Reactome pathway and systems biology data - Developed by Augmented Nature

v1.0.0 URL: https://unpkg.com/@iflow-mcp/reactome-server@1.0.0/build/index.js

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mcp model-context-protocol reactome pathways systems-biology bioinformatics molecular-pathways biological-networks pathway-analysis biochemical-reactions cellular-processes protein-interactions gene-regulation metabolic-pathways signaling-pathways disease-pathways drug-pathways biomedical